Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGE--LIDFKTPIRYIGSDFQEN-----VWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
| 1T38 Chain:A ((71-184)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPSHRVVCSSGAVGNYSGGLAVKEWLLAHE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19004 for 705 contacts (-27.0/contact) +
2D Compatibility (PS) -11810 + (NN) -4666 + (LL) 15648
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -30382.0 ( -43.10 by residue)
QMean score : 0.381
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