Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKITAPRIPDGDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIGMNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDLNKAQFLNCALNGIDLSSCIFESITAMPQDLKGMSIDFSHAPALM---PLFGIRVK
2BM7 Chain:A ((17-164))
------------------------------------------EDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCT---------------FERTTLWHSTFAQCSMLGSVFVACR-----LRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVD----PVLWRTASLVGARV-
General information:
TITO was launched using:
RESULT:
Template:
2BM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178265 for 1229 contacts (-145.0/contact) +
2D Compatibility (PS) -14627 + (NN) 3805 + (LL) 4564
1D Compatibility (HY) -5200 + (ID) 2200
Total energy: -191923.0 ( -156.16 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_2BM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BM7-query.scw
PDB file :
Tito_Scwrl_2BM7.pdb
: