Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VSRIDIGEIQAFLYQLRATNEPGRKTIQSIKAAVTKYVGDNSLKGKAVDASKNYYQMTYFPLCDAIIEAMDESEERLGQYIQDFHAEVDSSPDAKIDADGLYELGKMIDRIESKKEALAQRMNSGTEGQMQNYRSQLAIAYKQENILEKYLSFEQSHANFFDHLIDLVQAVQQTIRELQSNIQFNSQTGTYDLSKLNSATVSRMQQALNKSRGIKEDIIKELRDYTVLAVVYLDSNGKEQVMWLLERDGVGVENAELKAYLTENGKYLNPEDYTIITNEELNKKINQSWRDGVYYLNGNKYDGLTGGVLSTSAYVEAGKGYIDKSGFADVVLGLGLSTAAIRGSLVYKKVNGPYKQNIKNRYPNEVQQGKIFDYTLENGQVKIRDGIKEVDFIIDLQGNLKVGRGHAHLSNGGDVQAAGKLKVDSNGNVRRITNESGHYTPTLGQAKNYQQIFENTGINTKNAWLETYQLDVTKSGYVDLAKLKRIDSVKLK |
3FX7 Chain:A ((5-87)) | --QMDTEEVREFVGHLERFKELLREEVNSLSNHFHNL---ESWRDARRDKFSEVLDN-LKSTFNEFDEAAQEQIAWLKERIRVLEEDYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19483 for 409 contacts (-47.6/contact) +
2D Compatibility (PS) -8943 + (NN) -11 + (LL) 24304
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -8833.0 ( -21.60 by residue)
QMean score : 0.389
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