Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRQLGNAGLVTSELGFGCMGLNYHRGPAKDRNEMIEVVRTAMDAGITMFDTAEVYGPY--TNEE----LVGEALVGKRNHVQIATKGGFKI-NGLNNEVDSRPESIKAAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTIRRAHKVE-----PLAAVESEYSIWWREAEKE-VFPVLEELGIGLVAYSPLGRGYLTGKL-DINADFNANDNRGGLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLALAWILDQKPWIVPIPGTTRPSRIEENIASTEIHFDDGARQKIADALSQIEIVGDRYSAAENKRIGK |
| 3N6Q Chain:A ((13-312)) | MQYRYCGKSGLRLPAL---SLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSR-KYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL---------------------LTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENV--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125021 for 2173 contacts (-57.5/contact) +
2D Compatibility (PS) -28075 + (NN) -12409 + (LL) 2668
1D Compatibility (HY) -14400 + (ID) 4400
Total energy: -181637.0 ( -83.59 by residue)
QMean score : 0.546
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