Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKMIQTIILYSVFAVGFLYLLHFTLRKLENILTSFFYEVSQDQSLEKESLLRRLKRQKVATTQEEQKNRQLAIESEQKEVLFLEEIDQLIAQNKSYEQQLQAWENEQPKQIIEVPTFETTPHAPYKSLSSYINEIFQQVFIESEEDEARLFTEAIREFDALVRTEKIRCALPYKVILHLFEMYSPE-QLHLFAQSFQRYSERSSKLPVKQIYQSSYLSPEQKLKVMQEEGTLDELDAEFIQFLFYMMTHYSYRQTRNLYRNFLEVYNIHFYRGLICIHVASKGSANHFEKLWQPAHRSYKIEYQVQKELIGGVIIQYGSKSIDMSYQELIKRSTEKMEAEVKL |
| 1ABV Chain:A ((2-105)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------EFITVARPYAK--AAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAP-ETLAESFIAVCGE-QLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ABV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37489 for 781 contacts (-48.0/contact) +
2D Compatibility (PS) -10619 + (NN) -1767 + (LL) 22264
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -30611.0 ( -39.19 by residue)
QMean score : 0.409
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