Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFASA----DAEQAERIFERLNKRKQTESRRSNDK
2E5Y Chain:A ((4-107))
IHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIAVSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRLQSQ-------
General information:
TITO was launched using:
RESULT:
Template:
2E5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69539 for 651 contacts (-106.8/contact) +
2D Compatibility (PS) -10665 + (NN) -756 + (LL) 52
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -86608.0 ( -133.04 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_2E5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E5Y-query.scw
PDB file :
Tito_Scwrl_2E5Y.pdb
: