Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
| 3HCZ Chain:A ((30-45)) | -----------------------------------------------------------------------------------QAKYTILFFWDSQCGH--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1189 for 36 contacts (-33.0/contact) +
2D Compatibility (PS) -1826 + (NN) -987 + (LL) 17688
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 11736.0 ( 326.00 by residue)
QMean score : -0.165
|
|
|