Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFS--GTTYNISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
1U2W Chain:A ((35-107))
--------------ILKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFR----LALYSLGDEHIRQI------------
General information:
TITO was launched using:
RESULT:
Template:
1U2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39876 for 447 contacts (-89.2/contact) +
2D Compatibility (PS) -6565 + (NN) 1117 + (LL) 1788
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -49186.0 ( -110.04 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1U2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U2W-query.scw
PDB file :
Tito_Scwrl_1U2W.pdb
: