Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLMKFQLFIQPKLDVLQGNIVEYEILLR-DDSAVPRFPLSELEAVLADEELYLAFSEWFSEAFLDVLKKYPNDRFA-------INIAPQQLFYIETLHWLDKLKSESH----RITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVMSYLPY-IIEIKFSLIHFKNIPLE-DLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQGYLVNKPFPV
2R6O Chain:A ((42-266))
-------LHYQPIVELASGRIVGGEALVRWEDPERGLVMPSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRAADDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVM--------LVMTDEVRTCLDALRA---RGVRLALDDFGTGYSSLS-YLSQLPFHGLKIDQSFV--RKIPAHPSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTP---
General information:
TITO was launched using:
RESULT:
Template:
2R6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140811 for 1617 contacts (-87.1/contact) +
2D Compatibility (PS) -22595 + (NN) -13728 + (LL) 1328
1D Compatibility (HY) -13200 + (ID) 2900
Total energy: -191906.0 ( -118.68 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2R6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R6O-query.scw
PDB file :
Tito_Scwrl_2R6O.pdb
: