Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEETLLERGYRKYRGADVDIYFNTNVCEHSGNCVKGNVELFNLDR-KPW-IMPDN----VSKEEAKRVIHTCPSGALQYIEK
2FGO Chain:A ((2-62))
---------------------LKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD-
General information:
TITO was launched using:
RESULT:
Template:
2FGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11129 for 330 contacts (-33.7/contact) +
2D Compatibility (PS) -5530 + (NN) 1446 + (LL) 1504
1D Compatibility (HY) 0 + (ID) 400
Total energy: -14109.0 ( -42.75 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_2FGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FGO-query.scw
PDB file :
Tito_Scwrl_2FGO.pdb
: