Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK
2JOB Chain:A ((55-98))
-----------------------CPGWTAIRGEASTRSQSGVAGK---TAKDFVRKAFQKGLISQQEANQ------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JOB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2862 for 227 contacts (-12.6/contact) +
2D Compatibility (PS) -4416 + (NN) 46 + (LL) 3580
1D Compatibility (HY) 1600 + (ID) 300
Total energy: -2352.0 ( -10.36 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_2JOB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JOB-query.scw
PDB file :
Tito_Scwrl_2JOB.pdb
: