Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQLHTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDASKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMSRLKQRGLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK |
| 2VS0 Chain:A ((4-84)) | -----------------------------IKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEI--AANWEGQAFSRFEEQFQ-QLSPKVEKFAQLLEEIKQQLNSTADAVQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VS0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19818 for 466 contacts (-42.5/contact) +
2D Compatibility (PS) -8613 + (NN) -1396 + (LL) 23524
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -8853.0 ( -19.00 by residue)
QMean score : 0.325
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