Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINSRFYEGFEGEAELSFVAGDNKLLIWNGYFETILDNLLDCNVEREGVLKEYFNHEGWYDDSPWMIEDNSLTIIQLKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE
1XNE Chain:A ((4-28))
----------------------YRLYLKDEYLEMVKSGKKRIEVRVA-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XNE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7911 for 94 contacts (-84.2/contact) +
2D Compatibility (PS) -2655 + (NN) 638 + (LL) 6512
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -5216.0 ( -55.49 by residue)
QMean score : 0.053
(partial model without unconserved sides chains):
PDB file :
Tito_1XNE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNE-query.scw
PDB file :
Tito_Scwrl_1XNE.pdb
: