Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEQEIIEKVEILPNNFSENDSIYISQENIKNLVLFSKENQTVLELLITPFLICVNSGLKYELHY-YEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFVRREDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL
2B4G Chain:C ((107-171))
---------------------SVEESVEMVKKLVPITKEKGTILELNLS----CPNVPGKPQVGYDFDTTRTYLQKVSEAYGLPFGVKMP----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16611 for 370 contacts (-44.9/contact) +
2D Compatibility (PS) -6485 + (NN) 2545 + (LL) 6384
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -18917.0 ( -51.13 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_2B4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B4G-query.scw
PDB file :
Tito_Scwrl_2B4G.pdb
: