Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDWDFNNPESMKAWDLASGSYAEQVSG
1JMX Chain:G ((57-76))
-QDWNAQASNSAEDWRNLGTVFP-----
General information:
TITO was launched using:
RESULT:
Template:
1JMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2790 for 80 contacts (34.9/contact) +
2D Compatibility (PS) -2210 + (NN) -2950 + (LL) 860
1D Compatibility (HY) 2000 + (ID) 50
Total energy: 440.0 ( 5.50 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_1JMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JMX-query.scw
PDB file :
Tito_Scwrl_1JMX.pdb
: