Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKNYYTGFEGYPEIDFYTYINGEKTGIEMWEGYFDNIMNEFSPVDGRWVSLAYYYHLYEGWYDESPWVIPDNKKALEQFGTIDIKVLDNVTQEIMMKLIKLLKDNLDSEIFIEYS
1SW5 Chain:A ((203-244))
--------------------------------------------------------------------ILEDDKGALPPYDAIIIVNGNTAKDEKLISVLKLLEDRIDTD------
General information:
TITO was launched using:
RESULT:
Template:
1SW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 717 for 151 contacts (4.7/contact) +
2D Compatibility (PS) -4525 + (NN) -2888 + (LL) 4296
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -6600.0 ( -43.71 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1SW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SW5-query.scw
PDB file :
Tito_Scwrl_1SW5.pdb
: