Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
4EPM Chain:A ((15-66))
----------ETFEKQLKDLTSNVKSIQDNL---LEEIITPNTKTEYLQRFL-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EPM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2765 for 156 contacts (17.7/contact) +
2D Compatibility (PS) -4278 + (NN) -1982 + (LL) 5236
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -1309.0 ( -8.39 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_4EPM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EPM-query.scw
PDB file :
Tito_Scwrl_4EPM.pdb
: