Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIGVFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWATGNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIGGTMIGIAKS |
| 1KWC Chain:B ((2-32)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------IERLGYLGFAVK----DVPAWDHFLTKSVGLMAAG----------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -7262 for 110 contacts (-66.0/contact) +
2D Compatibility (PS) -3308 + (NN) 953 + (LL) 20548
1D Compatibility (HY) -4000 + (ID) 600
Total energy: 6331.0 ( 57.55 by residue)
QMean score : -0.202
|
|
|