Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELI------AKNVKKMCGNRDMNHLLGVGIAISGLVNRKKGTVIRSTMLGWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGEELKEAYPTSELNDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHRDLFLTKID-EIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR |
| 2HOE Chain:A ((31-367)) | --------------------------KSPVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEKDSP----RPTKSLKISPNCAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSK----LSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKY-GIEVWVENDADMGAVGEKWY--TKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNG----------------NEYVFLE--DVCNENVVLKHVLSMGFS-LAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHLLYKHS---VDMSFSKVQEPVIAFGAAV-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138681 for 2562 contacts (-54.1/contact) +
2D Compatibility (PS) -35054 + (NN) -15365 + (LL) 4852
1D Compatibility (HY) -26800 + (ID) 3750
Total energy: -214798.0 ( -83.84 by residue)
QMean score : 0.336
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