Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADGKALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGD--APDAFELNYETFMQYAEKGVLADL--TSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSIFNEDLTETTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFD------MFQDAPFKWDVQVEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSA----NEEAAKIRI----DNNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEKVLNGDSTPEKALKNSEDNINKTMGFK |
| 3K00 Chain:A ((27-405)) | --------------------------------VTFWDTSNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFK-NAAGGNSGAPDVMRTEVAWVADFASIGYLAPLDGTPALDDGSDHLP-----QAAASTRYEGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGATGLYLRGDDPYW---FLPYLYGEGGDLVDEKNKTVTVDDEAGVRAY-RVIKDLVDSKAAITDASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDAGNLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEKLSLLPTRTSVYEVPSVADNEMVKFF--------KPAVDKAVER----PWIAEGNALFEPIRLQMANVLSGETSPDEAAANTGDAYRKLL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39579 for 3179 contacts (-12.5/contact) +
2D Compatibility (PS) -38715 + (NN) -15203 + (LL) 2512
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -112335.0 ( -35.34 by residue)
QMean score : 0.426
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