Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVVGFNKETIDRALELAEKYDFISLIVGWHPTDAITFTDED----LEWLRDLALTHP-KVVALGEMGLDY-HWDTSPKETQFEVFRKQIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEVGGIMHCFGETVEVMEACLAMNFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLA---------------PTPNRGK-------RNEPGYVKLVAEKIAELKEMKYSEIATHSTENAKRLFRIKD
2XIO Chain:A ((27-290))
---------------DDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDITKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEANLEVL--KSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF----
General information:
TITO was launched using:
RESULT:
Template:
2XIO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148970 for 1933 contacts (-77.1/contact) +
2D Compatibility (PS) -26039 + (NN) -18492 + (LL) 1644
1D Compatibility (HY) -15600 + (ID) 4000
Total energy: -211457.0 ( -109.39 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_2XIO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIO-query.scw
PDB file :
Tito_Scwrl_2XIO.pdb
: