Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGKPVIHEFIVVEGRDD----TTAINRSVIADTIETNGSALSQETIEKIRHAQELRG--VIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE
2FCJ Chain:B ((4-84))
------VEKVIIVEGRSDKQKVAAVLNEPVV--IVCTNGT-ISDARLEEL--ADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDR---------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41221 for 454 contacts (-90.8/contact) +
2D Compatibility (PS) -8662 + (NN) -3611 + (LL) 7660
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -55284.0 ( -121.77 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2FCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCJ-query.scw
PDB file :
Tito_Scwrl_2FCJ.pdb
: