Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLERLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKK------RFDVKMGVRITIDKHIPVSAGLAGGSSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPNIPGCWIVLAKPSISVSTPTIYKELQVDNVEHPDTQKMIESIKNGDLDGIFAATGNVLESVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEVYMVRPWSEGENDTNINY |
1OJ4 Chain:A ((7-257)) | ------SPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV-EHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPV-DPPEKWYLVAHPGVSIPTPVIFKDPELPRNT---PKRSIETLLKCEF-------SNDCEVIARKRFREVDAVLSWLLEYA--PSRLTGTGACVFAEFDTESEARQV---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131068 for 2030 contacts (-64.6/contact) +
2D Compatibility (PS) -26016 + (NN) -3670 + (LL) 2108
1D Compatibility (HY) -16800 + (ID) 4200
Total energy: -179646.0 ( -88.50 by residue)
QMean score : 0.427
|
|
|