Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYKNYLQRTLVLLLCFILYFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPL----AQTQTMSLYQQLEAGIRYIDIRAK---DNL-NIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDT-----SNKIPTLKDVRGKILLLSE-NHTKKPLVINSRKFGMQF------------GAPNQVIQDDYNGPSVK--TKFKEIVQTAYQASKADNKL--FLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN |
| 3V1H Chain:A ((3-281)) | -----------------------------------------SKSPENWMSKLDDGKHLTEINIPGSHDSGSF------TLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKV---TKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNYASYINPEIAKTI--KANGKAR-TGWLIVDYA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86179 for 1884 contacts (-45.7/contact) +
2D Compatibility (PS) -26151 + (NN) -7566 + (LL) 4044
1D Compatibility (HY) -16000 + (ID) 4050
Total energy: -135902.0 ( -72.13 by residue)
QMean score : 0.530
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