Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVN-----HMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTY-----------LPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNY-------QATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE |
1GYG Chain:A ((8-194)) | -------------------------------------------------------------TGTHAMIVTQGVSILENDLSKNEPESVRKNL-EILKENMHELQLGSTYPDYDKNAYDL--YQDHFWDPDTDNNFSKDNSWYLAYSIPDTGESQIR--KFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHPANVTAVD--SAGHVKFETFAEERKEQYKINTVGCKTNEDFYADILKNKDFNAWSKEYAR--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43471 for 1103 contacts (-39.4/contact) +
2D Compatibility (PS) -17541 + (NN) -7995 + (LL) 7424
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -72033.0 ( -65.31 by residue)
QMean score : 0.357
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