Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVN-----HMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTY-----------LPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNY-------QATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE
1GYG Chain:A ((8-194))-------------------------------------------------------------TGTHAMIVTQGVSILENDLSKNEPESVRKNL-EILKENMHELQLGSTYPDYDKNAYDL--YQDHFWDPDTDNNFSKDNSWYLAYSIPDTGESQIR--KFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHPANVTAVD--SAGHVKFETFAEERKEQYKINTVGCKTNEDFYADILKNKDFNAWSKEYAR---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43471 for 1103 contacts (-39.4/contact) +
2D Compatibility (PS) -17541 + (NN) -7995 + (LL) 7424
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -72033.0 ( -65.31 by residue)
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_1GYG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GYG-query.scw
PDB file : Tito_Scwrl_1GYG.pdb: