Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHTLHRETK
2APO Chain:B ((17-29))
-------------------------------LKEICPKCGEKTV-----
General information:
TITO was launched using:
RESULT:
Template:
2APO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1553 for 41 contacts (37.9/contact) +
2D Compatibility (PS) -1254 + (NN) 935 + (LL) 2136
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 1170.0 ( 28.54 by residue)
QMean score : 0.052
(partial model without unconserved sides chains):
PDB file :
Tito_2APO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APO-query.scw
PDB file :
Tito_Scwrl_2APO.pdb
: