Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLITHVIWDMGETLNTVPNTRYDHYPLDTYPEVVLRKDAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNELQIDKTEAVMVGNTFESDIIGANRAGIHA-IWLQNPEVCLQDERQPLVAPPFVIPVWDLADVPEALLLLKKISS
2W4M Chain:A ((124-262))-----------------STRLQH--------MTLAEDVKAMLTELR----KEVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQ----REEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKNGIV------PLKSSP--VPHYMVSSVLELPALLQSI--


General information:
TITO was launched using:
RESULT:

Template: 2W4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36170 for 990 contacts (-36.5/contact) +
2D Compatibility (PS) -14610 + (NN) -9933 + (LL) 2556
1D Compatibility (HY) -10000 + (ID) 2100
Total energy: -70257.0 ( -70.97 by residue)
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_2W4M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W4M-query.scw
PDB file : Tito_Scwrl_2W4M.pdb: