Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLISKKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEK----------DFVFSL----------EMQSGKLI--FKKVDT-KEKVLIKETYKKN |
| 3AKN Chain:A ((2-107)) | -----------------------------------------------------------------------------------------------FDGTWKVDRNENYEKFMEKMGINVVKRKLGAHDNLKLTIT-QEGNKFTVKESSNFRNIDVVFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAVRE----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 12486 for 413 contacts (30.2/contact) +
2D Compatibility (PS) -9004 + (NN) 1168 + (LL) 5584
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: 4084.0 ( 9.89 by residue)
QMean score : 0.226
|
|
|