Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAELAVYFIAGTQDIVRGTLPSVLEEALKGGITCFQYREKGAGSLQTASERKEMALECQKLCAKYQVPFIINDDVALALEIGADGIHVGQTDEAIRQVIASCSGKMKIGLSVHSVSEAKEAERLGAVDYIGVGPIFPTISKADAEPVSGTAILEEIRRAGITIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKNPGSPS
3O16 Chain:A ((22-225))
MKELLSVYFIMGSNN-TKADPVTVVQKALKGGATLYQFREKGGDAL-TGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAI-GDMILGVSAHTMSEVKQAEEDGA-DYVGLGPIYPT-----------VSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFR------
General information:
TITO was launched using:
RESULT:
Template:
3O16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147317 for 1619 contacts (-91.0/contact) +
2D Compatibility (PS) -21604 + (NN) -14025 + (LL) 308
1D Compatibility (HY) -15200 + (ID) 4850
Total energy: -202688.0 ( -125.19 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_3O16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O16-query.scw
PDB file :
Tito_Scwrl_3O16.pdb
: