Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQDLQNRLVDQEILHGSDLLDEIHEVKQNNEQLIIELNT------KYHTKKEVTKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIEDNVLIGPGARLVTVNHLVSPKKRRGLR--VAPICVKKNAWIGANTTILSGVTIGENAIVAADATVTKDVPPNVIVAGSPAKQIRKIIEE
3NZ2 Chain:A ((24-186))
-----------------------EIEALRSQAGRLKLEINQSLDEAERYALQRELFGHLGHKSC--------VQPPFHCEFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQDVPPDTLVGGTPARILRSL---
General information:
TITO was launched using:
RESULT:
Template:
3NZ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104606 for 1196 contacts (-87.5/contact) +
2D Compatibility (PS) -17035 + (NN) -5221 + (LL) 2216
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -141196.0 ( -118.06 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3NZ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NZ2-query.scw
PDB file :
Tito_Scwrl_3NZ2.pdb
: