Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK |
| 2GMY Chain:A ((92-145)) | ------------------------------------------------------------------------------------------------------------------------VDAVTKIAETGAPDDAFETLRAHFSDEEIVKITVAIGAINTWNRIAVGFRSQHP------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3167 for 257 contacts (-12.3/contact) +
2D Compatibility (PS) -5672 + (NN) -2379 + (LL) 12336
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -1982.0 ( -7.71 by residue)
QMean score : 0.487
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