Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTIFPKEQNVTPLFEQILANPTACRRFKD-VFLDNLESYQETRGFEKDDTLFAKIILSAY-RQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKSGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK |
| 2LLV Chain:A ((139-195)) | -----------PNLIENLKKNPKTSEMMKDPQLVAKLIGYK------QNPQAI----GQDLFTDPRLMTIMATLMGVD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21711 for 317 contacts (-68.5/contact) +
2D Compatibility (PS) -5835 + (NN) -4600 + (LL) 15092
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -21104.0 ( -66.57 by residue)
QMean score : 0.376
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