Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPD----GDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
2Q1Y Chain:A ((236-294))
---------------------KAAEIAINSPLLEASMEGAQGVLMSIAGGSDLGLFEINEAASLVQDAAHPDANII-----FGTV--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6069 for 293 contacts (-20.7/contact) +
2D Compatibility (PS) -5671 + (NN) -1207 + (LL) 4564
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -12283.0 ( -41.92 by residue)
QMean score : -0.055
(partial model without unconserved sides chains):
PDB file :
Tito_2Q1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q1Y-query.scw
PDB file :
Tito_Scwrl_2Q1Y.pdb
: