Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTVASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSEDEMRLALQDISAILETCIRT----SDVLYLLDKDDATWGLLL-LTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV |
| 3PJX Chain:A ((6-174)) | --------------------------------------------------------------------------------------------------------------------EQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPE-QASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKYPETQNLVTRIRG--GEFAVLAPGMTREEALQLAQSLDSALSS-LYAT--GATDVAAVASIGLAPFAH--GDSPQAVLSLGDQALA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64060 for 1154 contacts (-55.5/contact) +
2D Compatibility (PS) -16503 + (NN) 575 + (LL) 12244
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -68844.0 ( -59.66 by residue)
QMean score : 0.418
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