Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LANIEYEIIEEIGVLSENARGWRKELNKVSWNGRPPKYDIRDWSEDHEKMGKGITLTDEEAEVLKKLLD
2LTT Chain:B ((5-69))
---LKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEEEFGVLLKEL-
General information:
TITO was launched using:
RESULT:
Template:
2LTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11579 for 379 contacts (30.6/contact) +
2D Compatibility (PS) -6651 + (NN) 533 + (LL) 164
1D Compatibility (HY) -7600 + (ID) 2350
Total energy: -4325.0 ( -11.41 by residue)
QMean score : -0.036
(partial model without unconserved sides chains):
PDB file :
Tito_2LTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTT-query.scw
PDB file :
Tito_Scwrl_2LTT.pdb
: