Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRKLGLMTILFWMFLSVQAFAADLEPPMISLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVEDLFEVKQLEEVAKDETAPSLKMIEITHDEDVLPTSVLYASAELDDAESGVKQAILLVHSKSNESEMELIRNNYTGEFDAEIPLEKFQLGEELTFQLQLVDFAENEITLDLENTIQLYEPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTATEWKGSLALTTELSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFS-KQMNQEIKPVIEMPDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
| 3FR5 Chain:A ((50-116)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVE---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1972 for 358 contacts (5.5/contact) +
2D Compatibility (PS) -7063 + (NN) -1519 + (LL) 28612
1D Compatibility (HY) -800 + (ID) 950
Total energy: 20252.0 ( 56.57 by residue)
QMean score : 0.277
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