Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENPEEDNKVFNYWWLAHLVEVRLDAYLRTKKQADLEIAENTYMHNKNRNGETLIHDFYDDMLWNALAAYRLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVE-DGINRLEDGAIDYEWKFTYNQGVYIGANLELYRITKEAKYLDTANKTADTSLKELTEDGIFKDEGSGGDEGL--------FKGIFYRYFTDLIEETADKTY-RDFVLNSCQILVESAKVDGYLLMGMNWKEKPSGKIPYSAELSGMIALEMAAKLER |
| 4MU9 Chain:A ((116-364)) | -----------------------------------------------------------------------------------------YYDDNIWIALDYCDYYRLTKKADYLKKAIALYE-YIYSGWSDELGGGIFWCEQQKEAKHTCSNAPSTVLGVKLYRLTKDKKYLNKAKETYAWTRKHLCDPDDFLYWDNINLKGKVSKD---KYAYNSGQMIQAGVLLYEETGDKDYLRDAQKTAAGT------DAFFRSKADKKDPSVKVHKDMSWFNVILFRGFKALEKIDHNPTYVRAMAENALHAWRNYRDANG--LLGRDWSG--HNEEPYKWLLDNACLIELFAEIEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70490 for 1918 contacts (-36.8/contact) +
2D Compatibility (PS) -24536 + (NN) -5880 + (LL) 7888
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -110568.0 ( -57.65 by residue)
QMean score : 0.363
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