Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRF-MDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL-QAARDKLETMTPNVKAIVGDEIKLLMADNE----AGVAVTFSGEAAEMLSENEDLEYVIPKD-GSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNLGKRMLSYYNELFLEFKMYRK |
2V84 Chain:A ((25-286)) | ----------------------------------DVLYLYNWTYYTPTSLIKKFEQQYNVQVVYDDYASNEDMFAKLSIGASGYDLVVPSGDFVSIMKRKHLLEKIDLSKIPNVQFIKESVRARIAYDPKMEYSVPYYLGAAGIAVNKKAVPSYA-RTWSIFSRKDLAYRMSMMDDMREVMGAALASLGYNVNTKNEQELAQAAILVTDHWKPNLVKFDSDGYAKSFASGDFVVAHGFAEAFFAETPEAMHEH--IDFFIPQDVASPVYVDSFCIPKGARNRDLAHAFINFFLEPAHYA----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111655 for 1946 contacts (-57.4/contact) +
2D Compatibility (PS) -27929 + (NN) -18699 + (LL) 8320
1D Compatibility (HY) -22800 + (ID) 4700
Total energy: -177463.0 ( -91.19 by residue)
QMean score : 0.499
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