Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GGIVILKRFFSYYKPYRTLF--IIDFGCAVLAAILELAFPVAVNHVIDTLLP-------GK-DFGLIITAALALLFFYILNTFMQYIVTYFGHMLGLNIETDMRRDLFSHLQKQPFGFYDNQKTGKLMSRMTTDLFEIGEVAHHGPEDIFISIMSLFGAFFLMLNINVKLAISTFILVPILTVLIVYFNKRMTKVTTGIFKDLGNFNAGVENAISGVRVVQAFANEPHEKGRFKVLNQAYRKSKLMFYKVMGLSFSFNYFLMRLISLFAL---LFGAYF-TINGEISYGEFVGFILLTNVFIRPIEKINNVIESYPKGFAGFKRFLEVMDTEPAIQDEKD--AKPAEAFRGDIAYNQVSFEYSDGKNV--LNHINLSIKAGETVAFVGPSGAGKTTICNLLPRFYDVSAGEITIDGENIKRFTLPSLRAQIGVVQQDVFLFSGTVRENIAYGKLDA-SDEEIEHVVKLAHLSKVVEEMPDGLDTIIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEQVIQASLEELAEGRTTLIIAHRLATIKHADRIIVVNETGIAETGTHDELLAQDNGAYKRLYDAQFNTI |
3B60 Chain:A ((10-580)) | ------------WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRF---DKVSNKMRLQGMKMVSAS-SISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSE----QEKDEGKRVIDRATGDLEFRNVTFTYP-GREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQ-HGVYAQLHKMQF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -295218 for 4174 contacts (-70.7/contact) +
2D Compatibility (PS) -58685 + (NN) -21446 + (LL) 1840
1D Compatibility (HY) -52000 + (ID) 10500
Total energy: -436009.0 ( -104.46 by residue)
QMean score : 0.362
|
|
|