Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTGWHRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNHISLTVFREDWLENL-----TLEATLRIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQ-LQLEGIYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYV---HTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGFHVLVGGELAPIIGRVCMDQTIIKLPR--EFQTGSKVTIIGKDHGNTITADDAAQYLDTINYEVTCLLNERIPRKYIH |
| 4LUT Chain:A ((7-372)) | -------PTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVARTAEGIELRQNGITLP-ILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKACVHVKID-------FQPNEESVQ-EIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNYKFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKD-RLELRPAMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNPKVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGE---VTAERIAKDLGTINYEVLCMISRRVDRVYME |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -229239 for 2884 contacts (-79.5/contact) +
2D Compatibility (PS) -37458 + (NN) -5465 + (LL) 832
1D Compatibility (HY) -27200 + (ID) 6300
Total energy: -304830.0 ( -105.70 by residue)
QMean score : 0.524
|
|
|