Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIVAAITAKIQKAKLPTHVEATRKDGFEKDSVILLEQIRTID-KQRLTDKITHLDEDLMAKVNKALEVSLGVVEF
2C06 Chain:A ((1-101))
--MERGEIWLVSLDPTAGHEQQGTRPVLIVTPAAFNRVTRLPVVVPVTSGGNFARTAGFAVSLDGVGIRTTGVVRCDQPRTIDMKARGGKRLERVPETIMNEV-------------
General information:
TITO was launched using:
RESULT:
Template:
2C06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27097 for 686 contacts (-39.5/contact) +
2D Compatibility (PS) -10288 + (NN) 630 + (LL) 1580
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -41475.0 ( -60.46 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_2C06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C06-query.scw
PDB file :
Tito_Scwrl_2C06.pdb
: