Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFIDNNNEKDPRINLAVEEFILTELNL-DEPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFI-TEDDGESFHNFAKFTQPIVEALKRLGVNAE----------LKGRNDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY |
2C7I Chain:A ((15-255)) | ------------RMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFVD--VSIDEVRNALIRGFSETLHI-DFREDTITEKEESLARELFDKKYSTEEWNMG--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113914 for 1739 contacts (-65.5/contact) +
2D Compatibility (PS) -23026 + (NN) -7152 + (LL) 7660
1D Compatibility (HY) -16400 + (ID) 3800
Total energy: -156632.0 ( -90.07 by residue)
QMean score : 0.550
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