Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVSD--FDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGI-TKDD---KFVT-PYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKL------DEFKEAGACGTAAVITPIGGIQTKD-DFHVFHSETEVGP-VTKRLFDELCGIQFGDVEAPEGWIYKVK
2HDK Chain:A ((28-365))---------LVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPD-AAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTAAQVAPVHRILYKDRNLHI--PTMENGPELILRFQKELKEIQYG-IRAHE-WMFPV-


General information:
TITO was launched using:
RESULT:

Template: 2HDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142452 for 2562 contacts (-55.6/contact) +
2D Compatibility (PS) -34974 + (NN) -13992 + (LL) 480
1D Compatibility (HY) -29600 + (ID) 5450
Total energy: -225988.0 ( -88.21 by residue)
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_2HDK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HDK-query.scw
PDB file : Tito_Scwrl_2HDK.pdb: