Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFITGNAGTVFGEWAVVEPLLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRDQVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVVEPPSAQPVIVEDNVVVGANVVVLEGVRIGEGAVVAAGAIV----------TKDVAPGTVVAG-------IPARE----------LKKLDAKTASKTEIMQELRQL
3BXY Chain:A ((104-273))
--------------------------------------------------------------------------------------------RVVPPAAVRQGAFIARNTV-LMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGDIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTR---GINELLRTI
General information:
TITO was launched using:
RESULT:
Template:
3BXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133147 for 1029 contacts (-129.4/contact) +
2D Compatibility (PS) -15114 + (NN) -1078 + (LL) 6692
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -157147.0 ( -152.72 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_3BXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BXY-query.scw
PDB file :
Tito_Scwrl_3BXY.pdb
: