Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDR-------LYSY--VLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2OS3 Chain:A ((12-192))
LITMDDIIREGNPTLRAVAKEVSLPLCDEDILLGEKMMQFLKHSQDPVMAEKLGLRAGVGLAAPQIDVSKRIIAVLVPNLPDKEGNPPKEAYSWQEVLYNPKIVSHSVQDAALSDGEGCLSVDRVVEGYVVRHARVTVDYYDKEGQQHRIKLKGYNAIVVQHEIDHINGVLFYDRINAKNP-----------
General information:
TITO was launched using:
RESULT:
Template:
2OS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85778 for 1309 contacts (-65.5/contact) +
2D Compatibility (PS) -18120 + (NN) -3526 + (LL) 152
1D Compatibility (HY) -21200 + (ID) 5250
Total energy: -133722.0 ( -102.16 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_2OS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS3-query.scw
PDB file :
Tito_Scwrl_2OS3.pdb
: