Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYSYPLNPDWTTEEMTIVVQFLEA-IERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP
1SUR Chain:A ((178-210))
---VLPII-DWDNRTIYQYLQKHGLKYHPLWDEGYLS------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6243 for 120 contacts (-52.0/contact) +
2D Compatibility (PS) -3256 + (NN) -1293 + (LL) 4636
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -8806.0 ( -73.38 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1SUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUR-query.scw
PDB file :
Tito_Scwrl_1SUR.pdb
: