Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSV-FEVFFRDMPFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDELGFDGP-FLEYLRNFKFKGNILAAKEGEFVFKTEPILQVEASLAEAQLIETALLNIV----NFQTLIATKAARIRSVIDDE----------------TFAEFGTRRA---QEMDAAIWGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYRDELEAFRSYAKTHFDSIFLVDTYDTLKSGVPNAIKVAKEMGD------KINFIGIRLDSGDMAFLSKKARQMLDEAG---FTEAKIFASSDLDEHTILSL-KAQKAKID-SWGVGTKLITAYDQPA---LGAVYKMAAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENVDKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWDEYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF |
| 1YIR Chain:A ((17-374)) | -----------LDTDFYKLTMMQAV----LHNYPNAEVEWEFRCRNQEDLRLYLPAIREQLEYLAGLAISDEQLAFL-ERIPFLAPDFIRFLGLFRFNPRYVQTG----IENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMAHQQLGPRLIDSQSAALDC-WVREYRGLLGIALTDCITTDAFLRDFDLYFAKL-FDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVF-SDGLDLPRALKIYRALQGRINVSFGIGTHFTC--DLPGVEPMNIVVKMSAC--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109204 for 2430 contacts (-44.9/contact) +
2D Compatibility (PS) -33703 + (NN) -12794 + (LL) 12540
1D Compatibility (HY) -23200 + (ID) 4150
Total energy: -170511.0 ( -70.17 by residue)
QMean score : 0.345
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