Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQGGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYELAESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAIMNEALKYEGYPYVFGG---SSPS---------TSFDCSGLTQWSYAVAGIQLPRVAQAQYDATQHIPLSEAKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAGDPIGYTNLTDSYWQAHLIGAGRIIK |
| 3PBC Chain:A ((330-447)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPN---GS--QHVTIYLGNGQMLEAPD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38024 for 725 contacts (-52.4/contact) +
2D Compatibility (PS) -11606 + (NN) -6627 + (LL) 14756
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -51151.0 ( -70.55 by residue)
QMean score : 0.416
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