Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGS-------LIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIEL--QYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI |
4TM6 Chain:A ((15-200)) | ----------------------IISNVSPEMAKKLELEPHHKSLGLITADCDDVTYT-ALDEATKAAEVDVV---YARSMYAGAGNASTKLAGEVIGILAGPSPAEVRSGLNATLDFIDSGVGFVSANEDDSICYYAQCVSRTGSYLSKTAGIREGEALAYLV-APPLEAMYALDAALKAADVEMCEFFAPPTETNFAGAL---LTGSQSACKAAC-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61972 for 1364 contacts (-45.4/contact) +
2D Compatibility (PS) -18645 + (NN) -5549 + (LL) 3580
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -96786.0 ( -70.96 by residue)
QMean score : 0.335
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