Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGLDIGTAKITPEEMDEIKHYLIDVTDPSEPFTAAKFQTETRKWIETIHQAGKLPIIVGGTGLYIQSVFYDYDFGNVSEDKAYRAELEQLNKTLLWQMLEQQ----DPESAAQIHENNKRRVIRALEVMHLTGKPFSE----------YQVHNVLNDTYKPLFLGLDLDRALLYERINQRVNLMFEEGLVTEAKKLY---DQHLVDVPAVCGIGYKELFPYFEGKSSLEEAKELIQKNSRHFAKRQLTWFRNRMEIDWIQAGVSTTEAEALNKAETFLSVK |
| 2ZM5 Chain:A ((12-295)) | -----AIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLS-PLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQ---------FAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLH-TDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111179 for 2028 contacts (-54.8/contact) +
2D Compatibility (PS) -29235 + (NN) -14070 + (LL) 2892
1D Compatibility (HY) -18400 + (ID) 5450
Total energy: -175442.0 ( -86.51 by residue)
QMean score : 0.496
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